Stephen Floor, PhD

Assistant Professor
Department of Cell & Tissue Biology
Research Overview: 

The Floor Lab studies the mechanisms by which RNA impacts human gene expression in health and disease. RNA chaperones are a major focus of the lab, which remodel RNA structures and RNA-protein interactions. We use deep sequencing, molecular biology of purified proteins, and imaging approaches to define the in vitro and cellular mechanisms of RNA chaperones. Many DEAD-box RNA chaperones are genetically altered in cancers and other diseases. We study the molecular basis of such alterations using cancer cell lines and genetically engineered stem cell models, aiming to better understand human biology and nominate new therapeutic targets or treatment regimens.

Primary Thematic Area: 
Cancer Biology & Cell Signaling
Secondary Thematic Area: 
Developmental & Stem Cell Biology
Research Summary: 
RNA-mediated control of gene expression in health and disease
Mentorship Development: 

4/12/19  Acknowleding and Negotiating the Mentee-Mentor Tensions Inherent in the Research Lab (Parnassus)

Websites

Publications: 

Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle.

Molecular cell

Ietswaart R, Smalec BM, Xu A, Choquet K, McShane E, Jowhar ZM, Guegler CK, Baxter-Koenigs AR, West ER, Fu BXH, Gilbert L, Floor SN, Churchman LS

IGHMBP2 deletion suppresses translation and activates the integrated stress response.

Life science alliance

Park J, Desai H, Liboy-Lugo JM, Gu S, Jowhar Z, Xu A, Floor SN

A novel reporter for helicase activity in translation uncovers DDX3X interactions.

RNA (New York, N.Y.)

Wilkins K, Schroeder T, Gu S, Revalde JL, Floor SN

Protein-protein interactions with G3BPs drive stress granule condensation and gene expression changes under cellular stress.

bioRxiv : the preprint server for biology

Liboy-Lugo JM, Espinoza CA, Sheu-Gruttadauria J, Park JE, Xu A, Jowhar Z, Gao AL, Carmona-Negrón JA, Wittmann T, Jura N, Floor SN

A ubiquitous GC content signature underlies multimodal mRNA regulation by DDX3X.

Molecular systems biology

Jowhar Z, Xu A, Venkataramanan S, Dossena F, Hoye ML, Silver DL, Floor SN, Calviello L