Benjamin Huang, MD

Asst Professor in Residence
Pediatrics
Research Overview: 

The research in our laboratory is focused on cancer modeling, molecular therapeutics, functional genomics, and biomarker discovery in hematologic cancers. Our research focuses primarily on pediatric acute myeloid leukemia (AML), which is characterized by frequent co-occurrence of fusion oncogenes and signal transduction mutations. While targeted inhibitors directed against either class of alteration have shown activity in AML, patients invariably relapse with treatment-refractory leukemia, underscoring the need for both a deeper understanding of how transcriptional and signaling mutations cooperate to drive leukemia growth and how these genetic alterations create novel dependencies. Thus, we are harnessing promising small molecule inhibitors and synthetic lethality approaches to uncover therapeutic vulnerabilities. We are also collaborating with the Children's Oncology Group (COG) to study the largest pediatric AML genome and transcriptome sequencing project to date (NCI TARGET). We are uncovering distinct transcriptional and epigenetic landscapes in pediatric AML, informing novel candidate biomarker signatures and immunotherapy targets. These data have also allowed us to achieve unprecedented residual disease detection using ultrasensitive molecular platforms in pediatric AML. Our overall goal is to develop new therapeutic and genomic strategies in AML to inform biology-driven, genetically stratified trials of innovative drug combinations.

Primary Thematic Area: 
Cancer Biology & Cell Signaling
Secondary Thematic Area: 
Human Genetics
Research Summary: 
Therapeutics and Functional Genomics in Hematologic Cancers

Websites

Publications: 

Hematopoietic Stem Cell Transplantation Outcomes for High-Risk AML: A Report From the Children's Oncology Group.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

Huang BJ, Meyer LK, Alonzo TA, Wang YC, Lamble AJ, Ries RE, Wang W, Hirsch B, Raca G, Ma X, Gamis AS, Aplenc R, Kolb EA, Cooper TM, Tarlock K, Loken MR, Meshinchi S, Chewning JH, Woods WG, Horan JT

TP53 Inactivation Confers Resistance to the Menin Inhibitor Revumenib in Acute Myeloid Leukemia.

bioRxiv : the preprint server for biology

D'Souza J, Leung CJ, Ballapuram AC, Lin AS, Batingana AR, Lamble AJ, Ries RE, Morales CE, Cottonham C, Gona P, Fan L, Ma X, Shannon K, Meshinchi S, Braun BS, Huang BJ

In vivo validation of the palmitoylation cycle as a therapeutic target in NRAS-mutant cancer.

bioRxiv : the preprint server for biology

Decker M, Huang BJ, Ware T, Boone C, Tang M, Ybarra J, Ballapuram AC, Taran KA, Chen PY, Amendáriz M, Leung CJ, Harris M, Tjoa K, Hongo H, Abelson S, Rivera J, Ngo N, Herbst DM, Suciu RM, Guijas C, Sedighi K, Andalis T, Roche E, Xie B, Liu Y, Smith CC, Stieglitz E, Niphakis MJ, Cravatt BF, Shannon K

De novo design of Ras isoform selective binders.

bioRxiv : the preprint server for biology

Zhang JZ, Li X, Batingana AR, Liu C, Jiang H, Shannon K, Huang BJ, Wu K, Baker D

Thrombopoietin Receptor Agonists for Thrombocytopenia in Pediatric Hematologic Malignancies.

Pediatric blood & cancer

Marinoff AE, Thrall A, Aaronson K, Braun BS, Castellanos M, Chu J, Hermiston M, Huang BJ, Levinson A, Southworth E, Winger BA, Olshen A, Stieglitz E